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Cluster: Rep_167_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_167_c_69 Rep_167_c_69_1 259 1455 - 2.A.1.35.1
CAZyme Rep_167_c_69 Rep_167_c_69_2 1888 4752 + GH2
STP Rep_167_c_69 Rep_167_c_69_3 4868 5221 - Response_reg
TC Rep_167_c_69 Rep_167_c_69_4 5254 6699 - 2.A.1.1.3
CAZyme Rep_167_c_69 Rep_167_c_69_5 6808 8799 - GH97
TC Rep_167_c_69 Rep_167_c_69_6 8843 9736 - 2.A.115.1.1
pfam Rep_167_c_69 Rep_167_c_69_7 9750 10760 - Semialdhyde_dh | Semialdhyde_dhC
TC Rep_167_c_69 Rep_167_c_69_8 11035 13107 + 2.A.37.2.5
TC Rep_167_c_69 Rep_167_c_69_9 13221 13961 + 3.A.1.125.1
Gene ID: Rep_167_c_69_1
Type: TC
Location: 259 - 1455 (-)
Gene ID: Rep_167_c_69_2
Type: CAZyme
Location: 1888 - 4752 (+)
Gene ID: Rep_167_c_69_3
Type: STP
Location: 4868 - 5221 (-)
Gene ID: Rep_167_c_69_4
Type: TC
Location: 5254 - 6699 (-)
Gene ID: Rep_167_c_69_5
Type: CAZyme
Location: 6808 - 8799 (-)
Gene ID: Rep_167_c_69_6
Type: TC
Location: 8843 - 9736 (-)
Gene ID: Rep_167_c_69_7
Type: pfam
Location: 9750 - 10760 (-)
Gene ID: Rep_167_c_69_8
Type: TC
Location: 11035 - 13107 (+)
Gene ID: Rep_167_c_69_9
Type: TC
Location: 13221 - 13961 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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