Cluster: Rep_1677_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1677
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1677_c_68 | Rep_1677_c_68_1 | 18 | 632 | + | 2.A.115.2.14 |
| CAZyme | Rep_1677_c_68 | Rep_1677_c_68_2 | 824 | 2671 | + | CBM48 | GH13_9 |
| pfam | Rep_1677_c_68 | Rep_1677_c_68_3 | 2664 | 3875 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_1677_c_68 | Rep_1677_c_68_4 | 3877 | 4992 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_1677_c_68 | Rep_1677_c_68_5 | 5053 | 6516 | + | GT5 |
| CAZyme | Rep_1677_c_68 | Rep_1677_c_68_6 | 6536 | 8962 | + | GT35 |
Gene ID: Rep_1677_c_68_1
Type: TC
Location: 18 - 632 (+)
Type: TC
Location: 18 - 632 (+)
Gene ID: Rep_1677_c_68_2
Type: CAZyme
Location: 824 - 2671 (+)
Type: CAZyme
Location: 824 - 2671 (+)
Gene ID: Rep_1677_c_68_3
Type: pfam
Location: 2664 - 3875 (+)
Type: pfam
Location: 2664 - 3875 (+)
Gene ID: Rep_1677_c_68_4
Type: pfam
Location: 3877 - 4992 (+)
Type: pfam
Location: 3877 - 4992 (+)
Gene ID: Rep_1677_c_68_5
Type: CAZyme
Location: 5053 - 6516 (+)
Type: CAZyme
Location: 5053 - 6516 (+)
Gene ID: Rep_1677_c_68_6
Type: CAZyme
Location: 6536 - 8962 (+)
Type: CAZyme
Location: 6536 - 8962 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1677_c_68_3 | vegetarian > vegan | 5.28080 | 0.04105 |