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Cluster: Rep_1677_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1677_c_162 Rep_1677_c_162_6 5249 6385 + CE9
NULL(UNKNOWN) Rep_1677_c_162 Rep_1677_c_162_7 6479 7174 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1677_c_162 Rep_1677_c_162_8 7161 7880 + 3.A.1.147.6
TC Rep_1677_c_162 Rep_1677_c_162_9 7873 9465 + 3.A.1.147.6
NULL(UNKNOWN) Rep_1677_c_162 Rep_1677_c_162_10 9565 10212 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1677_c_162 Rep_1677_c_162_11 10187 11098 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1677_c_162 Rep_1677_c_162_12 11091 11714 + 3.A.1.147.8
Gene ID: Rep_1677_c_162_6
Type: CAZyme
Location: 5249 - 6385 (+)
Gene ID: Rep_1677_c_162_7
Type:
Location: 6479 - 7174 (+)
Gene ID: Rep_1677_c_162_8
Type: TC
Location: 7161 - 7880 (+)
Gene ID: Rep_1677_c_162_9
Type: TC
Location: 7873 - 9465 (+)
Gene ID: Rep_1677_c_162_10
Type:
Location: 9565 - 10212 (+)
Gene ID: Rep_1677_c_162_11
Type:
Location: 10187 - 11098 (+)
Gene ID: Rep_1677_c_162_12
Type: TC
Location: 11091 - 11714 (+)

Taxonomic Lineage

Domain
Bacteria
Family
CAG-313
Genus
CAG-313

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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