Cluster: Rep_1677_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1677
- CGC Family ID: CGCFAM_00036
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1677_c_152 | Rep_1677_c_152_3 | 2562 | 4004 | + | 2.A.66.2.10 |
| pfam | Rep_1677_c_152 | Rep_1677_c_152_4 | 4005 | 5132 | + | GLF | NAD_binding_8 |
| CAZyme | Rep_1677_c_152 | Rep_1677_c_152_5 | 5137 | 6021 | + | GT111 |
Gene ID: Rep_1677_c_152_3
Type: TC
Location: 2562 - 4004 (+)
Type: TC
Location: 2562 - 4004 (+)
Gene ID: Rep_1677_c_152_4
Type: pfam
Location: 4005 - 5132 (+)
Type: pfam
Location: 4005 - 5132 (+)
Gene ID: Rep_1677_c_152_5
Type: CAZyme
Location: 5137 - 6021 (+)
Type: CAZyme
Location: 5137 - 6021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1677_c_152_5 | vegetarian > omnivore | 1.67926 | 0.03044 |