Cluster: Rep_1677_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1677
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1677_c_27 | Rep_1677_c_27_1 | 461 | 1723 | + | 2.A.66.2.10 |
| pfam | Rep_1677_c_27 | Rep_1677_c_27_2 | 1720 | 2346 | + | Hexapep | Hexapep_2 |
| CAZyme | Rep_1677_c_27 | Rep_1677_c_27_3 | 2330 | 3217 | + | GT2 |
| CAZyme | Rep_1677_c_27 | Rep_1677_c_27_4 | 3214 | 4308 | + | GT4 |
| TC | Rep_1677_c_27 | Rep_1677_c_27_5 | 4305 | 5687 | + | 9.B.67.3.2 |
| CAZyme | Rep_1677_c_27 | Rep_1677_c_27_6 | 5692 | 6687 | + | GT2 |
Gene ID: Rep_1677_c_27_1
Type: TC
Location: 461 - 1723 (+)
Type: TC
Location: 461 - 1723 (+)
Gene ID: Rep_1677_c_27_2
Type: pfam
Location: 1720 - 2346 (+)
Type: pfam
Location: 1720 - 2346 (+)
Gene ID: Rep_1677_c_27_3
Type: CAZyme
Location: 2330 - 3217 (+)
Type: CAZyme
Location: 2330 - 3217 (+)
Gene ID: Rep_1677_c_27_4
Type: CAZyme
Location: 3214 - 4308 (+)
Type: CAZyme
Location: 3214 - 4308 (+)
Gene ID: Rep_1677_c_27_5
Type: TC
Location: 4305 - 5687 (+)
Type: TC
Location: 4305 - 5687 (+)
Gene ID: Rep_1677_c_27_6
Type: CAZyme
Location: 5692 - 6687 (+)
Type: CAZyme
Location: 5692 - 6687 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1677_c_27_2 | vegetarian > omnivore | 1.19600 | 0.03044 |
| Rep_1677_c_27_3 | vegetarian > omnivore | 1.24334 | 0.03044 |
| Rep_1677_c_27_3 | vegetarian > vegan | 1.18059 | 0.04105 |
| Rep_1677_c_27_4 | vegetarian > omnivore | 1.25587 | 0.03044 |
| Rep_1677_c_27_5 | vegetarian > omnivore | 1.32037 | 0.03044 |
| Rep_1677_c_27_5 | vegetarian > vegan | 1.06622 | 0.04105 |
| Rep_1677_c_27_6 | vegetarian > omnivore | 1.65386 | 0.03044 |