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Cluster: Rep_1676_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1676_c_0 Rep_1676_c_0_578 656474 658276 + GH20
pfam Rep_1676_c_0 Rep_1676_c_0_579 658276 661752 + SBP_bac_8
NULL(UNKNOWN) Rep_1676_c_0 Rep_1676_c_0_580 661771 662190 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1676_c_0 Rep_1676_c_0_581 662243 663472 + 3.A.1.1.34
TC Rep_1676_c_0 Rep_1676_c_0_582 663474 664499 + 3.A.1.1.39
pfam Rep_1676_c_0 Rep_1676_c_0_583 664515 667421 + Yip1
pfam Rep_1676_c_0 Rep_1676_c_0_584 667434 670763 + DUF5696
TC Rep_1676_c_0 Rep_1676_c_0_585 670770 671849 + 3.A.1.1.25
TC Rep_1676_c_0 Rep_1676_c_0_586 671833 672996 + 3.A.1.1.24
Gene ID: Rep_1676_c_0_578
Type: CAZyme
Location: 656474 - 658276 (+)
Gene ID: Rep_1676_c_0_579
Type: pfam
Location: 658276 - 661752 (+)
Gene ID: Rep_1676_c_0_580
Type:
Location: 661771 - 662190 (+)
Gene ID: Rep_1676_c_0_581
Type: TC
Location: 662243 - 663472 (+)
Gene ID: Rep_1676_c_0_582
Type: TC
Location: 663474 - 664499 (+)
Gene ID: Rep_1676_c_0_583
Type: pfam
Location: 664515 - 667421 (+)
Gene ID: Rep_1676_c_0_584
Type: pfam
Location: 667434 - 670763 (+)
Gene ID: Rep_1676_c_0_585
Type: TC
Location: 670770 - 671849 (+)
Gene ID: Rep_1676_c_0_586
Type: TC
Location: 671833 - 672996 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp003539625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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