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Cluster: Rep_1676_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1676_c_0 Rep_1676_c_0_528 603905 605797 + 9.B.18.2.1
TC Rep_1676_c_0 Rep_1676_c_0_529 605815 606447 + 9.B.18.1.2
CAZyme Rep_1676_c_0 Rep_1676_c_0_530 606447 607334 + GT2
pfam Rep_1676_c_0 Rep_1676_c_0_531 607354 608481 + EpsG
NULL(UNKNOWN) Rep_1676_c_0 Rep_1676_c_0_532 608503 609783 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1676_c_0 Rep_1676_c_0_533 609764 610984 + GT4
NULL(UNKNOWN) Rep_1676_c_0 Rep_1676_c_0_534 611001 612131 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1676_c_0 Rep_1676_c_0_535 612124 613638 + Polysacc_synt | MurJ
TC Rep_1676_c_0 Rep_1676_c_0_536 613649 614695 + 9.B.18.2.1
Gene ID: Rep_1676_c_0_528
Type: TC
Location: 603905 - 605797 (+)
Gene ID: Rep_1676_c_0_529
Type: TC
Location: 605815 - 606447 (+)
Gene ID: Rep_1676_c_0_530
Type: CAZyme
Location: 606447 - 607334 (+)
Gene ID: Rep_1676_c_0_531
Type: pfam
Location: 607354 - 608481 (+)
Gene ID: Rep_1676_c_0_532
Type:
Location: 608503 - 609783 (+)
Gene ID: Rep_1676_c_0_533
Type: CAZyme
Location: 609764 - 610984 (+)
Gene ID: Rep_1676_c_0_534
Type:
Location: 611001 - 612131 (+)
Gene ID: Rep_1676_c_0_535
Type: pfam
Location: 612124 - 613638 (+)
Gene ID: Rep_1676_c_0_536
Type: TC
Location: 613649 - 614695 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
ML615J-28
→
Family
CAG-313
→
Genus
CAG-313
→
Species
CAG-313 sp003539625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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