Cluster: Rep_1676_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: Rep_1676
- CGC Family ID: CGCFAM_00004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1676_c_0 | Rep_1676_c_0_1229 | 1412747 | 1415173 | - | GT35 |
| CAZyme | Rep_1676_c_0 | Rep_1676_c_0_1230 | 1415184 | 1416644 | - | GT5 |
| pfam | Rep_1676_c_0 | Rep_1676_c_0_1231 | 1416693 | 1417808 | - | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_1676_c_0 | Rep_1676_c_0_1232 | 1417810 | 1419018 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_1676_c_0 | Rep_1676_c_0_1233 | 1419011 | 1420858 | - | GH13_9 |
| TC | Rep_1676_c_0 | Rep_1676_c_0_1234 | 1421035 | 1421646 | - | 2.A.115.2.14 |
Gene ID: Rep_1676_c_0_1229
Type: CAZyme
Location: 1412747 - 1415173 (-)
Type: CAZyme
Location: 1412747 - 1415173 (-)
Gene ID: Rep_1676_c_0_1230
Type: CAZyme
Location: 1415184 - 1416644 (-)
Type: CAZyme
Location: 1415184 - 1416644 (-)
Gene ID: Rep_1676_c_0_1231
Type: pfam
Location: 1416693 - 1417808 (-)
Type: pfam
Location: 1416693 - 1417808 (-)
Gene ID: Rep_1676_c_0_1232
Type: pfam
Location: 1417810 - 1419018 (-)
Type: pfam
Location: 1417810 - 1419018 (-)
Gene ID: Rep_1676_c_0_1233
Type: CAZyme
Location: 1419011 - 1420858 (-)
Type: CAZyme
Location: 1419011 - 1420858 (-)
Gene ID: Rep_1676_c_0_1234
Type: TC
Location: 1421035 - 1421646 (-)
Type: TC
Location: 1421035 - 1421646 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-313
Genus
CAG-313
Species
CAG-313 sp003539625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.