Cluster: Rep_1665_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1665
- CGC Family ID: CGCFAM_04422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1665_c_53 | Rep_1665_c_53_11 | 9717 | 10850 | - | GT28 |
| TF | Rep_1665_c_53 | Rep_1665_c_53_12 | 10989 | 11609 | + | LexA_DNA_bind |
| TC | Rep_1665_c_53 | Rep_1665_c_53_13 | 11644 | 12810 | - | 9.B.104.1.4 |
Gene ID: Rep_1665_c_53_11
Type: CAZyme
Location: 9717 - 10850 (-)
Type: CAZyme
Location: 9717 - 10850 (-)
Gene ID: Rep_1665_c_53_12
Type: TF
Location: 10989 - 11609 (+)
Type: TF
Location: 10989 - 11609 (+)
Gene ID: Rep_1665_c_53_13
Type: TC
Location: 11644 - 12810 (-)
Type: TC
Location: 11644 - 12810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Coprovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.