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Cluster: Rep_1665_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1665_c_46 Rep_1665_c_46_6 6995 8539 - 2.A.66.1.40
pfam Rep_1665_c_46 Rep_1665_c_46_7 8570 9676 - PS_pyruv_trans
NULL(UNKNOWN) Rep_1665_c_46 Rep_1665_c_46_8 9673 10626 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1665_c_46 Rep_1665_c_46_9 10645 11835 - GT4
pfam Rep_1665_c_46 Rep_1665_c_46_10 11862 12908 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme Rep_1665_c_46 Rep_1665_c_46_11 12920 14008 - GT4
NULL(UNKNOWN) Rep_1665_c_46 Rep_1665_c_46_12 14001 15098 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1665_c_46 Rep_1665_c_46_13 15123 16247 - GT4
Gene ID: Rep_1665_c_46_6
Type: TC
Location: 6995 - 8539 (-)
Gene ID: Rep_1665_c_46_7
Type: pfam
Location: 8570 - 9676 (-)
Gene ID: Rep_1665_c_46_8
Type:
Location: 9673 - 10626 (-)
Gene ID: Rep_1665_c_46_9
Type: CAZyme
Location: 10645 - 11835 (-)
Gene ID: Rep_1665_c_46_10
Type: pfam
Location: 11862 - 12908 (-)
Gene ID: Rep_1665_c_46_11
Type: CAZyme
Location: 12920 - 14008 (-)
Gene ID: Rep_1665_c_46_12
Type:
Location: 14001 - 15098 (-)
Gene ID: Rep_1665_c_46_13
Type: CAZyme
Location: 15123 - 16247 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Coprovivens
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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