Cluster: Rep_1665_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1665
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1665_c_28 | Rep_1665_c_28_78 | 68737 | 69786 | - | GH5_2 |
| CAZyme | Rep_1665_c_28 | Rep_1665_c_28_79 | 69788 | 71398 | - | GT2 |
| pfam | Rep_1665_c_28 | Rep_1665_c_28_80 | 71504 | 71941 | - | Big_14 |
| TC | Rep_1665_c_28 | Rep_1665_c_28_81 | 72058 | 73800 | - | 3.A.1.135.2 |
Gene ID: Rep_1665_c_28_78
Type: CAZyme
Location: 68737 - 69786 (-)
Type: CAZyme
Location: 68737 - 69786 (-)
Gene ID: Rep_1665_c_28_79
Type: CAZyme
Location: 69788 - 71398 (-)
Type: CAZyme
Location: 69788 - 71398 (-)
Gene ID: Rep_1665_c_28_80
Type: pfam
Location: 71504 - 71941 (-)
Type: pfam
Location: 71504 - 71941 (-)
Gene ID: Rep_1665_c_28_81
Type: TC
Location: 72058 - 73800 (-)
Type: TC
Location: 72058 - 73800 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Coprovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.