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Cluster: Rep_1656_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1656_c_0 Rep_1656_c_0_412 337949 338446 - GH25
NULL(UNKNOWN) Rep_1656_c_0 Rep_1656_c_0_413 338453 339154 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1656_c_0 Rep_1656_c_0_414 339236 339781 + CpXC
TC Rep_1656_c_0 Rep_1656_c_0_415 339778 340797 + 3.A.1.121.4
TC Rep_1656_c_0 Rep_1656_c_0_416 340778 341656 + 3.A.1.121.5
pfam Rep_1656_c_0 Rep_1656_c_0_417 341690 341944 - Coat_F
NULL(UNKNOWN) Rep_1656_c_0 Rep_1656_c_0_418 341938 342123 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1656_c_0 Rep_1656_c_0_419 342211 342642 + 2.A.4.7.4
TC Rep_1656_c_0 Rep_1656_c_0_420 342636 343082 + 2.A.4.7.6
Gene ID: Rep_1656_c_0_412
Type: CAZyme
Location: 337949 - 338446 (-)
Gene ID: Rep_1656_c_0_413
Type:
Location: 338453 - 339154 (-)
Gene ID: Rep_1656_c_0_414
Type: pfam
Location: 339236 - 339781 (+)
Gene ID: Rep_1656_c_0_415
Type: TC
Location: 339778 - 340797 (+)
Gene ID: Rep_1656_c_0_416
Type: TC
Location: 340778 - 341656 (+)
Gene ID: Rep_1656_c_0_417
Type: pfam
Location: 341690 - 341944 (-)
Gene ID: Rep_1656_c_0_418
Type:
Location: 341938 - 342123 (-)
Gene ID: Rep_1656_c_0_419
Type: TC
Location: 342211 - 342642 (+)
Gene ID: Rep_1656_c_0_420
Type: TC
Location: 342636 - 343082 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-582
→
Species
CAG-582 sp000435515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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