dbCAN Logo

Cluster: Rep_1643_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1643_c_10 Rep_1643_c_10_21 18482 19435 - GT8
CAZyme Rep_1643_c_10 Rep_1643_c_10_22 19432 20244 - GT8
pfam Rep_1643_c_10 Rep_1643_c_10_23 20247 20708 - ACPS
pfam Rep_1643_c_10 Rep_1643_c_10_24 20701 20925 - PP-binding
TC Rep_1643_c_10 Rep_1643_c_10_25 20922 22499 - 4.C.1.1.4
Gene ID: Rep_1643_c_10_21
Type: CAZyme
Location: 18482 - 19435 (-)
Gene ID: Rep_1643_c_10_22
Type: CAZyme
Location: 19432 - 20244 (-)
Gene ID: Rep_1643_c_10_23
Type: pfam
Location: 20247 - 20708 (-)
Gene ID: Rep_1643_c_10_24
Type: pfam
Location: 20701 - 20925 (-)
Gene ID: Rep_1643_c_10_25
Type: TC
Location: 20922 - 22499 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RF39
Family
UBA660

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List