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Cluster: Rep_1643_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1643_c_3 Rep_1643_c_3_95 88366 89964 - GT4
pfam Rep_1643_c_3 Rep_1643_c_3_96 89961 91361 - O-antigen_lig
CAZyme Rep_1643_c_3 Rep_1643_c_3_97 91375 92328 - GT2
CAZyme Rep_1643_c_3 Rep_1643_c_3_98 92325 93284 - GT2
pfam Rep_1643_c_3 Rep_1643_c_3_99 93348 94229 - Glycos_transf_1
pfam Rep_1643_c_3 Rep_1643_c_3_100 94243 95304 - Sulfotransfer_1
TC Rep_1643_c_3 Rep_1643_c_3_101 95306 96751 - 2.A.66.2.22
TF Rep_1643_c_3 Rep_1643_c_3_102 96896 98638 + 0040266
pfam Rep_1643_c_3 Rep_1643_c_3_103 98635 99345 + NTP_transferase | NTP_transf_3
TC Rep_1643_c_3 Rep_1643_c_3_104 99350 100900 + 2.A.15.2.2
Gene ID: Rep_1643_c_3_95
Type: CAZyme
Location: 88366 - 89964 (-)
Gene ID: Rep_1643_c_3_96
Type: pfam
Location: 89961 - 91361 (-)
Gene ID: Rep_1643_c_3_97
Type: CAZyme
Location: 91375 - 92328 (-)
Gene ID: Rep_1643_c_3_98
Type: CAZyme
Location: 92325 - 93284 (-)
Gene ID: Rep_1643_c_3_99
Type: pfam
Location: 93348 - 94229 (-)
Gene ID: Rep_1643_c_3_100
Type: pfam
Location: 94243 - 95304 (-)
Gene ID: Rep_1643_c_3_101
Type: TC
Location: 95306 - 96751 (-)
Gene ID: Rep_1643_c_3_102
Type: TF
Location: 96896 - 98638 (+)
Gene ID: Rep_1643_c_3_103
Type: pfam
Location: 98635 - 99345 (+)
Gene ID: Rep_1643_c_3_104
Type: TC
Location: 99350 - 100900 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Onthocola_B
→
Species
Onthocola_B sp900544625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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