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Cluster: Rep_1643_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1643_c_2 Rep_1643_c_2_75 64215 65978 + 3.A.1.135.6
TC Rep_1643_c_2 Rep_1643_c_2_76 65962 68220 + 3.A.1.135.6
TF Rep_1643_c_2 Rep_1643_c_2_77 68308 69009 + Trans_reg_C
STP Rep_1643_c_2 Rep_1643_c_2_78 68987 70573 + HATPase_c | HisKA
TC Rep_1643_c_2 Rep_1643_c_2_79 70622 72106 + 4.C.1.1.7
pfam Rep_1643_c_2 Rep_1643_c_2_80 72106 73296 + Orn_DAP_Arg_deC | Ala_racemase_N | Orn_Arg_deC_N
pfam Rep_1643_c_2 Rep_1643_c_2_81 73296 73526 + PP-binding
TC Rep_1643_c_2 Rep_1643_c_2_82 73528 75117 + 2.A.50.2.1
NULL(UNKNOWN) Rep_1643_c_2 Rep_1643_c_2_83 75128 76096 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1643_c_2 Rep_1643_c_2_84 76275 77477 + CBM50 | CBM50 | CBM50
Gene ID: Rep_1643_c_2_75
Type: TC
Location: 64215 - 65978 (+)
Gene ID: Rep_1643_c_2_76
Type: TC
Location: 65962 - 68220 (+)
Gene ID: Rep_1643_c_2_77
Type: TF
Location: 68308 - 69009 (+)
Gene ID: Rep_1643_c_2_78
Type: STP
Location: 68987 - 70573 (+)
Gene ID: Rep_1643_c_2_79
Type: TC
Location: 70622 - 72106 (+)
Gene ID: Rep_1643_c_2_80
Type: pfam
Location: 72106 - 73296 (+)
Gene ID: Rep_1643_c_2_81
Type: pfam
Location: 73296 - 73526 (+)
Gene ID: Rep_1643_c_2_82
Type: TC
Location: 73528 - 75117 (+)
Gene ID: Rep_1643_c_2_83
Type:
Location: 75128 - 76096 (+)
Gene ID: Rep_1643_c_2_84
Type: CAZyme
Location: 76275 - 77477 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Onthocola_B
→
Species
Onthocola_B sp900544625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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