Cluster: Rep_1635_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1635
- CGC Family ID: CGCFAM_00202
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1635_c_13 | Rep_1635_c_13_19 | 15047 | 17299 | + | 3.A.7.7.1 |
| NULL(UNKNOWN) | Rep_1635_c_13 | Rep_1635_c_13_20 | 17331 | 17765 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_1635_c_13 | Rep_1635_c_13_21 | 17825 | 18085 | + | Rhodanese |
| TC | Rep_1635_c_13 | Rep_1635_c_13_22 | 18182 | 19081 | + | 3.A.1.132.6 |
| pfam | Rep_1635_c_13 | Rep_1635_c_13_23 | 19059 | 21005 | + | ABC2_membrane_2 |
| TF | Rep_1635_c_13 | Rep_1635_c_13_24 | 20995 | 21348 | + | GntR |
| CAZyme | Rep_1635_c_13 | Rep_1635_c_13_25 | 21350 | 22564 | + | GT2 |
Gene ID: Rep_1635_c_13_19
Type: TC
Location: 15047 - 17299 (+)
Type: TC
Location: 15047 - 17299 (+)
Gene ID: Rep_1635_c_13_20
Type:
Location: 17331 - 17765 (+)
Type:
Location: 17331 - 17765 (+)
Gene ID: Rep_1635_c_13_21
Type: STP
Location: 17825 - 18085 (+)
Type: STP
Location: 17825 - 18085 (+)
Gene ID: Rep_1635_c_13_22
Type: TC
Location: 18182 - 19081 (+)
Type: TC
Location: 18182 - 19081 (+)
Gene ID: Rep_1635_c_13_23
Type: pfam
Location: 19059 - 21005 (+)
Type: pfam
Location: 19059 - 21005 (+)
Gene ID: Rep_1635_c_13_24
Type: TF
Location: 20995 - 21348 (+)
Type: TF
Location: 20995 - 21348 (+)
Gene ID: Rep_1635_c_13_25
Type: CAZyme
Location: 21350 - 22564 (+)
Type: CAZyme
Location: 21350 - 22564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Caccenecus
Species
Caccenecus sp900549285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.