Cluster: Rep_1635_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1635
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1635_c_8 | Rep_1635_c_8_22 | 15993 | 17543 | - | 3.A.1.12.8 |
| TC | Rep_1635_c_8 | Rep_1635_c_8_23 | 17558 | 18667 | - | 3.A.1.12.4 |
| pfam | Rep_1635_c_8 | Rep_1635_c_8_24 | 18669 | 20333 | - | CoA_trans |
| pfam | Rep_1635_c_8 | Rep_1635_c_8_25 | 20334 | 21563 | - | Acyl_transf_3 |
| CAZyme | Rep_1635_c_8 | Rep_1635_c_8_26 | 21623 | 22990 | - | CE4 |
Gene ID: Rep_1635_c_8_22
Type: TC
Location: 15993 - 17543 (-)
Type: TC
Location: 15993 - 17543 (-)
Gene ID: Rep_1635_c_8_23
Type: TC
Location: 17558 - 18667 (-)
Type: TC
Location: 17558 - 18667 (-)
Gene ID: Rep_1635_c_8_24
Type: pfam
Location: 18669 - 20333 (-)
Type: pfam
Location: 18669 - 20333 (-)
Gene ID: Rep_1635_c_8_25
Type: pfam
Location: 20334 - 21563 (-)
Type: pfam
Location: 20334 - 21563 (-)
Gene ID: Rep_1635_c_8_26
Type: CAZyme
Location: 21623 - 22990 (-)
Type: CAZyme
Location: 21623 - 22990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Caccenecus
Species
Caccenecus sp900549285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.