Cluster: Rep_162_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_162
- CGC Family ID: CGCFAM_00164
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_162_c_3 | Rep_162_c_3_28 | 33351 | 34325 | - | 2.A.115.1.5 |
| pfam | Rep_162_c_3 | Rep_162_c_3_29 | 34339 | 37473 | - | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | Rep_162_c_3 | Rep_162_c_3_30 | 37920 | 40253 | - | PL9 |
| NULL(UNKNOWN) | Rep_162_c_3 | Rep_162_c_3_31 | 40296 | 40481 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_162_c_3 | Rep_162_c_3_32 | 41065 | 46854 | + | CBM77 | GH105 |
Gene ID: Rep_162_c_3_28
Type: TC
Location: 33351 - 34325 (-)
Type: TC
Location: 33351 - 34325 (-)
Gene ID: Rep_162_c_3_29
Type: pfam
Location: 34339 - 37473 (-)
Type: pfam
Location: 34339 - 37473 (-)
Gene ID: Rep_162_c_3_30
Type: CAZyme
Location: 37920 - 40253 (-)
Type: CAZyme
Location: 37920 - 40253 (-)
Gene ID: Rep_162_c_3_31
Type:
Location: 40296 - 40481 (-)
Type:
Location: 40296 - 40481 (-)
Gene ID: Rep_162_c_3_32
Type: CAZyme
Location: 41065 - 46854 (+)
Type: CAZyme
Location: 41065 - 46854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900547005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.