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Cluster: Rep_162_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_162_c_1 Rep_162_c_1_126 156508 157842 + 9.B.126.2.2
pfam Rep_162_c_1 Rep_162_c_1_127 157850 158926 - Asn_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
CAZyme Rep_162_c_1 Rep_162_c_1_128 159311 160285 - CE8
STP Rep_162_c_1 Rep_162_c_1_129 160414 162696 - HD
CAZyme Rep_162_c_1 Rep_162_c_1_130 162780 164153 - GH23
pfam Rep_162_c_1 Rep_162_c_1_131 164190 164888 - DUF5683
TF Rep_162_c_1 Rep_162_c_1_132 164938 165846 - HTH_3
TC Rep_162_c_1 Rep_162_c_1_133 165848 166612 - 8.A.3.2.3
Gene ID: Rep_162_c_1_126
Type: TC
Location: 156508 - 157842 (+)
Gene ID: Rep_162_c_1_127
Type: pfam
Location: 157850 - 158926 (-)
Gene ID: Rep_162_c_1_128
Type: CAZyme
Location: 159311 - 160285 (-)
Gene ID: Rep_162_c_1_129
Type: STP
Location: 160414 - 162696 (-)
Gene ID: Rep_162_c_1_130
Type: CAZyme
Location: 162780 - 164153 (-)
Gene ID: Rep_162_c_1_131
Type: pfam
Location: 164190 - 164888 (-)
Gene ID: Rep_162_c_1_132
Type: TF
Location: 164938 - 165846 (-)
Gene ID: Rep_162_c_1_133
Type: TC
Location: 165848 - 166612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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