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Cluster: Rep_162_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_162_c_44 Rep_162_c_44_2 1194 4067 + GH81
peptidase Rep_162_c_44 Rep_162_c_44_3 4421 8305 + C56.972
TC Rep_162_c_44 Rep_162_c_44_4 8549 9082 + 2.A.51.1.6
TC Rep_162_c_44 Rep_162_c_44_5 9158 9733 + 2.A.51.1.6
NULL(UNKNOWN) Rep_162_c_44 Rep_162_c_44_6 9823 10779 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_162_c_44 Rep_162_c_44_7 10946 11671 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_162_c_44 Rep_162_c_44_8 11772 13049 - GH53
CAZyme Rep_162_c_44 Rep_162_c_44_9 13062 15071 - GH13_6
CAZyme Rep_162_c_44 Rep_162_c_44_10 16462 18885 + GH88 | PL38
Gene ID: Rep_162_c_44_2
Type: CAZyme
Location: 1194 - 4067 (+)
Gene ID: Rep_162_c_44_3
Type: peptidase
Location: 4421 - 8305 (+)
Gene ID: Rep_162_c_44_4
Type: TC
Location: 8549 - 9082 (+)
Gene ID: Rep_162_c_44_5
Type: TC
Location: 9158 - 9733 (+)
Gene ID: Rep_162_c_44_6
Type:
Location: 9823 - 10779 (-)
Gene ID: Rep_162_c_44_7
Type:
Location: 10946 - 11671 (+)
Gene ID: Rep_162_c_44_8
Type: CAZyme
Location: 11772 - 13049 (-)
Gene ID: Rep_162_c_44_9
Type: CAZyme
Location: 13062 - 15071 (-)
Gene ID: Rep_162_c_44_10
Type: CAZyme
Location: 16462 - 18885 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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