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Cluster: Rep_162_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_162_c_34 Rep_162_c_34_6 4675 7689 + GH77
pfam Rep_162_c_34 Rep_162_c_34_7 7713 8174 + GH97_N
CAZyme Rep_162_c_34 Rep_162_c_34_8 8171 9820 + GH97
CAZyme Rep_162_c_34 Rep_162_c_34_9 9919 11892 + GH13_14
CAZyme Rep_162_c_34 Rep_162_c_34_10 11908 13848 + GH13_46
STP Rep_162_c_34 Rep_162_c_34_11 14091 15212 + ATPase_2
pfam Rep_162_c_34 Rep_162_c_34_12 15456 16058 + DUF4254
CAZyme Rep_162_c_34 Rep_162_c_34_13 16154 17212 + GT9
pfam Rep_162_c_34 Rep_162_c_34_14 17228 17389 + Rubredoxin
TC Rep_162_c_34 Rep_162_c_34_15 17767 19440 - 3.A.1.135.5
Gene ID: Rep_162_c_34_6
Type: CAZyme
Location: 4675 - 7689 (+)
Gene ID: Rep_162_c_34_7
Type: pfam
Location: 7713 - 8174 (+)
Gene ID: Rep_162_c_34_8
Type: CAZyme
Location: 8171 - 9820 (+)
Gene ID: Rep_162_c_34_9
Type: CAZyme
Location: 9919 - 11892 (+)
Gene ID: Rep_162_c_34_10
Type: CAZyme
Location: 11908 - 13848 (+)
Gene ID: Rep_162_c_34_11
Type: STP
Location: 14091 - 15212 (+)
Gene ID: Rep_162_c_34_12
Type: pfam
Location: 15456 - 16058 (+)
Gene ID: Rep_162_c_34_13
Type: CAZyme
Location: 16154 - 17212 (+)
Gene ID: Rep_162_c_34_14
Type: pfam
Location: 17228 - 17389 (+)
Gene ID: Rep_162_c_34_15
Type: TC
Location: 17767 - 19440 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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