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Cluster: Rep_162_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_162_c_8 Rep_162_c_8_9 10932 13526 + GH31_15
pfam Rep_162_c_8 Rep_162_c_8_10 13534 14832 + SusF_SusE
TC Rep_162_c_8 Rep_162_c_8_11 15119 18118 + 1.B.14.6.1
pfam Rep_162_c_8 Rep_162_c_8_12 18176 19912 + SusD_RagB | SusD-like_3
pfam Rep_162_c_8 Rep_162_c_8_13 20106 21314 + SusF_SusE | SusF_SusE | SusF_SusE
CAZyme Rep_162_c_8 Rep_162_c_8_14 21368 22768 + GH27
CAZyme Rep_162_c_8 Rep_162_c_8_15 22930 25074 + GH97
CAZyme Rep_162_c_8 Rep_162_c_8_16 25242 28058 + GH66
Gene ID: Rep_162_c_8_9
Type: CAZyme
Location: 10932 - 13526 (+)
Gene ID: Rep_162_c_8_10
Type: pfam
Location: 13534 - 14832 (+)
Gene ID: Rep_162_c_8_11
Type: TC
Location: 15119 - 18118 (+)
Gene ID: Rep_162_c_8_12
Type: pfam
Location: 18176 - 19912 (+)
Gene ID: Rep_162_c_8_13
Type: pfam
Location: 20106 - 21314 (+)
Gene ID: Rep_162_c_8_14
Type: CAZyme
Location: 21368 - 22768 (+)
Gene ID: Rep_162_c_8_15
Type: CAZyme
Location: 22930 - 25074 (+)
Gene ID: Rep_162_c_8_16
Type: CAZyme
Location: 25242 - 28058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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