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Cluster: Rep_1619_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1619_c_5 Rep_1619_c_5_18 14759 16567 + 1.A.33.1.4
peptidase Rep_1619_c_5 Rep_1619_c_5_19 16615 18405 + M03.UPB
pfam Rep_1619_c_5 Rep_1619_c_5_20 18416 19510 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
CAZyme Rep_1619_c_5 Rep_1619_c_5_21 19535 21418 - GT51
Gene ID: Rep_1619_c_5_18
Type: TC
Location: 14759 - 16567 (+)
Gene ID: Rep_1619_c_5_19
Type: peptidase
Location: 16615 - 18405 (+)
Gene ID: Rep_1619_c_5_20
Type: pfam
Location: 18416 - 19510 (+)
Gene ID: Rep_1619_c_5_21
Type: CAZyme
Location: 19535 - 21418 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RF39
Family
UBA660

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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