Cluster: Rep_1612_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1612
- CGC Family ID: CGCFAM_02115
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1612_c_4 | Rep_1612_c_4_27 | 16423 | 17424 | + | GT4 |
| pfam | Rep_1612_c_4 | Rep_1612_c_4_28 | 17443 | 18462 | + | ApbE |
| pfam | Rep_1612_c_4 | Rep_1612_c_4_29 | 18434 | 18802 | + | NusG_II |
| TC | Rep_1612_c_4 | Rep_1612_c_4_30 | 18804 | 19298 | + | 2.A.87.3.2 |
Gene ID: Rep_1612_c_4_27
Type: CAZyme
Location: 16423 - 17424 (+)
Type: CAZyme
Location: 16423 - 17424 (+)
Gene ID: Rep_1612_c_4_28
Type: pfam
Location: 17443 - 18462 (+)
Type: pfam
Location: 17443 - 18462 (+)
Gene ID: Rep_1612_c_4_29
Type: pfam
Location: 18434 - 18802 (+)
Type: pfam
Location: 18434 - 18802 (+)
Gene ID: Rep_1612_c_4_30
Type: TC
Location: 18804 - 19298 (+)
Type: TC
Location: 18804 - 19298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
OMSK01
Species
OMSK01 sp934167935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.