Cluster: Rep_1612_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1612
- CGC Family ID: CGCFAM_00328
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1612_c_26 | Rep_1612_c_26_8 | 8084 | 8542 | + | 9.B.105.1.5 |
| pfam | Rep_1612_c_26 | Rep_1612_c_26_9 | 8532 | 9419 | + | PseudoU_synth_2 | S4 |
| pfam | Rep_1612_c_26 | Rep_1612_c_26_10 | 9409 | 9861 | - | TspO_MBR |
| TC | Rep_1612_c_26 | Rep_1612_c_26_11 | 9921 | 11072 | + | 9.B.104.1.3 |
| pfam | Rep_1612_c_26 | Rep_1612_c_26_12 | 11146 | 12786 | + | DUF6020 |
| CAZyme | Rep_1612_c_26 | Rep_1612_c_26_13 | 12776 | 13705 | + | GT2 |
Gene ID: Rep_1612_c_26_8
Type: TC
Location: 8084 - 8542 (+)
Type: TC
Location: 8084 - 8542 (+)
Gene ID: Rep_1612_c_26_9
Type: pfam
Location: 8532 - 9419 (+)
Type: pfam
Location: 8532 - 9419 (+)
Gene ID: Rep_1612_c_26_10
Type: pfam
Location: 9409 - 9861 (-)
Type: pfam
Location: 9409 - 9861 (-)
Gene ID: Rep_1612_c_26_11
Type: TC
Location: 9921 - 11072 (+)
Type: TC
Location: 9921 - 11072 (+)
Gene ID: Rep_1612_c_26_12
Type: pfam
Location: 11146 - 12786 (+)
Type: pfam
Location: 11146 - 12786 (+)
Gene ID: Rep_1612_c_26_13
Type: CAZyme
Location: 12776 - 13705 (+)
Type: CAZyme
Location: 12776 - 13705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
OMSK01
Species
OMSK01 sp934167935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.