Cluster: Rep_1612_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1612
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1612_c_22 | Rep_1612_c_22_1 | 60 | 845 | - | 3.A.1.17.6 |
| TC | Rep_1612_c_22 | Rep_1612_c_22_2 | 838 | 1584 | - | 3.A.1.17.13 |
| pfam | Rep_1612_c_22 | Rep_1612_c_22_3 | 1584 | 2573 | - | NMT1 | NMT1_2 |
| NULL(UNKNOWN) | Rep_1612_c_22 | Rep_1612_c_22_4 | 2755 | 3312 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1612_c_22 | Rep_1612_c_22_5 | 3318 | 4394 | + | GT2 |
| pfam | Rep_1612_c_22 | Rep_1612_c_22_6 | 4417 | 5616 | + | ThiI | THUMP | ThiI_fer |
| pfam | Rep_1612_c_22 | Rep_1612_c_22_7 | 5692 | 5895 | + | SASP |
| TC | Rep_1612_c_22 | Rep_1612_c_22_8 | 5955 | 7076 | + | 8.A.59.4.1 |
Gene ID: Rep_1612_c_22_1
Type: TC
Location: 60 - 845 (-)
Type: TC
Location: 60 - 845 (-)
Gene ID: Rep_1612_c_22_2
Type: TC
Location: 838 - 1584 (-)
Type: TC
Location: 838 - 1584 (-)
Gene ID: Rep_1612_c_22_3
Type: pfam
Location: 1584 - 2573 (-)
Type: pfam
Location: 1584 - 2573 (-)
Gene ID: Rep_1612_c_22_4
Type:
Location: 2755 - 3312 (+)
Type:
Location: 2755 - 3312 (+)
Gene ID: Rep_1612_c_22_5
Type: CAZyme
Location: 3318 - 4394 (+)
Type: CAZyme
Location: 3318 - 4394 (+)
Gene ID: Rep_1612_c_22_6
Type: pfam
Location: 4417 - 5616 (+)
Type: pfam
Location: 4417 - 5616 (+)
Gene ID: Rep_1612_c_22_7
Type: pfam
Location: 5692 - 5895 (+)
Type: pfam
Location: 5692 - 5895 (+)
Gene ID: Rep_1612_c_22_8
Type: TC
Location: 5955 - 7076 (+)
Type: TC
Location: 5955 - 7076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
OMSK01
Species
OMSK01 sp934167935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.