Cluster: Rep_1607_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1607
- CGC Family ID: CGCFAM_00328
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1607_c_10 | Rep_1607_c_10_12 | 9024 | 9929 | + | GT2 |
| NULL(UNKNOWN) | Rep_1607_c_10 | Rep_1607_c_10_13 | 9933 | 10433 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1607_c_10 | Rep_1607_c_10_14 | 10721 | 11191 | + | 9.B.105.1.5 |
| pfam | Rep_1607_c_10 | Rep_1607_c_10_15 | 11166 | 12056 | + | PseudoU_synth_2 | S4 |
| NULL(UNKNOWN) | Rep_1607_c_10 | Rep_1607_c_10_16 | 12043 | 12489 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1607_c_10 | Rep_1607_c_10_17 | 12547 | 13695 | + | 9.B.104.1.3 |
Gene ID: Rep_1607_c_10_12
Type: CAZyme
Location: 9024 - 9929 (+)
Type: CAZyme
Location: 9024 - 9929 (+)
Gene ID: Rep_1607_c_10_13
Type:
Location: 9933 - 10433 (+)
Type:
Location: 9933 - 10433 (+)
Gene ID: Rep_1607_c_10_14
Type: TC
Location: 10721 - 11191 (+)
Type: TC
Location: 10721 - 11191 (+)
Gene ID: Rep_1607_c_10_15
Type: pfam
Location: 11166 - 12056 (+)
Type: pfam
Location: 11166 - 12056 (+)
Gene ID: Rep_1607_c_10_16
Type:
Location: 12043 - 12489 (-)
Type:
Location: 12043 - 12489 (-)
Gene ID: Rep_1607_c_10_17
Type: TC
Location: 12547 - 13695 (+)
Type: TC
Location: 12547 - 13695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
JALELF01
Species
JALELF01 sp022771715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.