Cluster: Rep_1607_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_1607
- CGC Family ID: CGCFAM_00018
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1607_c_3 | Rep_1607_c_3_55 | 49740 | 51014 | - | GT4 |
| pfam | Rep_1607_c_3 | Rep_1607_c_3_56 | 50992 | 53400 | - | Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 |
| CAZyme | Rep_1607_c_3 | Rep_1607_c_3_57 | 53415 | 54500 | - | GT4 |
| CAZyme | Rep_1607_c_3 | Rep_1607_c_3_58 | 54513 | 55670 | - | GT4 |
| pfam | Rep_1607_c_3 | Rep_1607_c_3_59 | 55678 | 56781 | - | Epimerase | FdtA | Polysacc_synt_C |
| TC | Rep_1607_c_3 | Rep_1607_c_3_60 | 56778 | 57782 | - | 9.B.18.2.1 |
| CAZyme | Rep_1607_c_3 | Rep_1607_c_3_61 | 57784 | 58998 | - | GT4 |
| NULL(UNKNOWN) | Rep_1607_c_3 | Rep_1607_c_3_62 | 59008 | 59622 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1607_c_3 | Rep_1607_c_3_63 | 59726 | 60397 | - | GT2 |
| pfam | Rep_1607_c_3 | Rep_1607_c_3_64 | 60483 | 61022 | - | CNNM |
| pfam | Rep_1607_c_3 | Rep_1607_c_3_65 | 61766 | 63271 | - | Sulfatase |
| TC | Rep_1607_c_3 | Rep_1607_c_3_66 | 63258 | 64310 | - | 9.B.146.1.1 |
Gene ID: Rep_1607_c_3_55
Type: CAZyme
Location: 49740 - 51014 (-)
Type: CAZyme
Location: 49740 - 51014 (-)
Gene ID: Rep_1607_c_3_56
Type: pfam
Location: 50992 - 53400 (-)
Type: pfam
Location: 50992 - 53400 (-)
Gene ID: Rep_1607_c_3_57
Type: CAZyme
Location: 53415 - 54500 (-)
Type: CAZyme
Location: 53415 - 54500 (-)
Gene ID: Rep_1607_c_3_58
Type: CAZyme
Location: 54513 - 55670 (-)
Type: CAZyme
Location: 54513 - 55670 (-)
Gene ID: Rep_1607_c_3_59
Type: pfam
Location: 55678 - 56781 (-)
Type: pfam
Location: 55678 - 56781 (-)
Gene ID: Rep_1607_c_3_60
Type: TC
Location: 56778 - 57782 (-)
Type: TC
Location: 56778 - 57782 (-)
Gene ID: Rep_1607_c_3_61
Type: CAZyme
Location: 57784 - 58998 (-)
Type: CAZyme
Location: 57784 - 58998 (-)
Gene ID: Rep_1607_c_3_62
Type:
Location: 59008 - 59622 (-)
Type:
Location: 59008 - 59622 (-)
Gene ID: Rep_1607_c_3_63
Type: CAZyme
Location: 59726 - 60397 (-)
Type: CAZyme
Location: 59726 - 60397 (-)
Gene ID: Rep_1607_c_3_64
Type: pfam
Location: 60483 - 61022 (-)
Type: pfam
Location: 60483 - 61022 (-)
Gene ID: Rep_1607_c_3_65
Type: pfam
Location: 61766 - 63271 (-)
Type: pfam
Location: 61766 - 63271 (-)
Gene ID: Rep_1607_c_3_66
Type: TC
Location: 63258 - 64310 (-)
Type: TC
Location: 63258 - 64310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
JALELF01
Species
JALELF01 sp022771715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.