Cluster: Rep_1607_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_1607
- CGC Family ID: CGCFAM_00015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1607_c_1 | Rep_1607_c_1_84 | 74540 | 75682 | + | GT2 |
| CAZyme | Rep_1607_c_1 | Rep_1607_c_1_85 | 75683 | 76633 | - | GT2 |
| CAZyme | Rep_1607_c_1 | Rep_1607_c_1_86 | 76630 | 77751 | - | GT4 |
| pfam | Rep_1607_c_1 | Rep_1607_c_1_87 | 77748 | 79175 | - | O-antigen_lig |
| CAZyme | Rep_1607_c_1 | Rep_1607_c_1_88 | 79172 | 80128 | - | GT2 |
| CAZyme | Rep_1607_c_1 | Rep_1607_c_1_89 | 80125 | 81003 | - | GT14 |
| TC | Rep_1607_c_1 | Rep_1607_c_1_90 | 81005 | 82522 | - | 2.A.66.1.40 |
Gene ID: Rep_1607_c_1_84
Type: CAZyme
Location: 74540 - 75682 (+)
Type: CAZyme
Location: 74540 - 75682 (+)
Gene ID: Rep_1607_c_1_85
Type: CAZyme
Location: 75683 - 76633 (-)
Type: CAZyme
Location: 75683 - 76633 (-)
Gene ID: Rep_1607_c_1_86
Type: CAZyme
Location: 76630 - 77751 (-)
Type: CAZyme
Location: 76630 - 77751 (-)
Gene ID: Rep_1607_c_1_87
Type: pfam
Location: 77748 - 79175 (-)
Type: pfam
Location: 77748 - 79175 (-)
Gene ID: Rep_1607_c_1_88
Type: CAZyme
Location: 79172 - 80128 (-)
Type: CAZyme
Location: 79172 - 80128 (-)
Gene ID: Rep_1607_c_1_89
Type: CAZyme
Location: 80125 - 81003 (-)
Type: CAZyme
Location: 80125 - 81003 (-)
Gene ID: Rep_1607_c_1_90
Type: TC
Location: 81005 - 82522 (-)
Type: TC
Location: 81005 - 82522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
JALELF01
Species
JALELF01 sp022771715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.