Cluster: Rep_15_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_15
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_15_c_22 | Rep_15_c_22_37 | 40140 | 42998 | + | 3.A.12.1.1 |
| CAZyme | Rep_15_c_22 | Rep_15_c_22_38 | 43160 | 44017 | + | GH18 |
| NULL(UNKNOWN) | Rep_15_c_22 | Rep_15_c_22_39 | 44125 | 45840 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_15_c_22 | Rep_15_c_22_40 | 46065 | 46844 | + | 3.A.1.24.5 |
Gene ID: Rep_15_c_22_37
Type: TC
Location: 40140 - 42998 (+)
Type: TC
Location: 40140 - 42998 (+)
Gene ID: Rep_15_c_22_38
Type: CAZyme
Location: 43160 - 44017 (+)
Type: CAZyme
Location: 43160 - 44017 (+)
Gene ID: Rep_15_c_22_39
Type:
Location: 44125 - 45840 (-)
Type:
Location: 44125 - 45840 (-)
Gene ID: Rep_15_c_22_40
Type: TC
Location: 46065 - 46844 (+)
Type: TC
Location: 46065 - 46844 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp017935745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.