Cluster: Rep_15_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_15
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_15_c_15 | Rep_15_c_15_1 | 89 | 2098 | - | 3.A.11.3.1 |
| pfam | Rep_15_c_15 | Rep_15_c_15_2 | 2070 | 2888 | - | UDG |
| CAZyme | Rep_15_c_15 | Rep_15_c_15_3 | 2885 | 4111 | - | GT4 |
Gene ID: Rep_15_c_15_1
Type: TC
Location: 89 - 2098 (-)
Type: TC
Location: 89 - 2098 (-)
Gene ID: Rep_15_c_15_2
Type: pfam
Location: 2070 - 2888 (-)
Type: pfam
Location: 2070 - 2888 (-)
Gene ID: Rep_15_c_15_3
Type: CAZyme
Location: 2885 - 4111 (-)
Type: CAZyme
Location: 2885 - 4111 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp017935745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.