Cluster: Rep_15_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_15
- CGC Family ID: CGCFAM_01771
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_15_c_58 | Rep_15_c_58_68 | 80649 | 82832 | - | GH35 |
| TC | Rep_15_c_58 | Rep_15_c_58_69 | 83412 | 84254 | - | 3.A.1.1.6 |
| TC | Rep_15_c_58 | Rep_15_c_58_70 | 84251 | 85573 | - | 3.A.1.1.6 |
| TC | Rep_15_c_58 | Rep_15_c_58_71 | 85694 | 86908 | - | 3.A.1.1.22 |
Gene ID: Rep_15_c_58_68
Type: CAZyme
Location: 80649 - 82832 (-)
Type: CAZyme
Location: 80649 - 82832 (-)
Gene ID: Rep_15_c_58_69
Type: TC
Location: 83412 - 84254 (-)
Type: TC
Location: 83412 - 84254 (-)
Gene ID: Rep_15_c_58_70
Type: TC
Location: 84251 - 85573 (-)
Type: TC
Location: 84251 - 85573 (-)
Gene ID: Rep_15_c_58_71
Type: TC
Location: 85694 - 86908 (-)
Type: TC
Location: 85694 - 86908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp017935745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.