Cluster: Rep_15_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_15
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_15_c_51 | Rep_15_c_51_11 | 9468 | 9914 | - | 4.A.2.1.4 |
| TF | Rep_15_c_51 | Rep_15_c_51_12 | 10162 | 11049 | - | HTH_AraC |
| CAZyme | Rep_15_c_51 | Rep_15_c_51_13 | 11256 | 14060 | + | GH3 |
Gene ID: Rep_15_c_51_11
Type: TC
Location: 9468 - 9914 (-)
Type: TC
Location: 9468 - 9914 (-)
Gene ID: Rep_15_c_51_12
Type: TF
Location: 10162 - 11049 (-)
Type: TF
Location: 10162 - 11049 (-)
Gene ID: Rep_15_c_51_13
Type: CAZyme
Location: 11256 - 14060 (+)
Type: CAZyme
Location: 11256 - 14060 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp017935745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.