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Cluster: Rep_15_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_15_c_49 Rep_15_c_49_31 35476 37011 - 2.A.21.2.5
TC Rep_15_c_49 Rep_15_c_49_32 37014 38648 - 4.C.1.1.6
CAZyme Rep_15_c_49 Rep_15_c_49_33 38771 40489 - GH3
pfam Rep_15_c_49 Rep_15_c_49_34 40625 41140 + UDG
STP Rep_15_c_49 Rep_15_c_49_35 41361 41981 + NUDIX
TC Rep_15_c_49 Rep_15_c_49_36 42060 43802 + 3.A.1.106.2
NULL(UNKNOWN) Rep_15_c_49 Rep_15_c_49_37 43826 44692 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_15_c_49 Rep_15_c_49_38 44746 46563 - GT8
CAZyme Rep_15_c_49 Rep_15_c_49_39 46560 47393 - GT8
Gene ID: Rep_15_c_49_31
Type: TC
Location: 35476 - 37011 (-)
Gene ID: Rep_15_c_49_32
Type: TC
Location: 37014 - 38648 (-)
Gene ID: Rep_15_c_49_33
Type: CAZyme
Location: 38771 - 40489 (-)
Gene ID: Rep_15_c_49_34
Type: pfam
Location: 40625 - 41140 (+)
Gene ID: Rep_15_c_49_35
Type: STP
Location: 41361 - 41981 (+)
Gene ID: Rep_15_c_49_36
Type: TC
Location: 42060 - 43802 (+)
Gene ID: Rep_15_c_49_37
Type:
Location: 43826 - 44692 (-)
Gene ID: Rep_15_c_49_38
Type: CAZyme
Location: 44746 - 46563 (-)
Gene ID: Rep_15_c_49_39
Type: CAZyme
Location: 46560 - 47393 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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