Cluster: Rep_15_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_15
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_15_c_48 | Rep_15_c_48_19 | 19498 | 21525 | - | 1.B.52.2.2 |
| STP | Rep_15_c_48 | Rep_15_c_48_20 | 21559 | 22032 | - | Hemerythrin |
| TC | Rep_15_c_48 | Rep_15_c_48_21 | 22179 | 24245 | - | 1.B.52.2.1 |
| CAZyme | Rep_15_c_48 | Rep_15_c_48_22 | 24414 | 26012 | - | GT5 |
Gene ID: Rep_15_c_48_19
Type: TC
Location: 19498 - 21525 (-)
Type: TC
Location: 19498 - 21525 (-)
Gene ID: Rep_15_c_48_20
Type: STP
Location: 21559 - 22032 (-)
Type: STP
Location: 21559 - 22032 (-)
Gene ID: Rep_15_c_48_21
Type: TC
Location: 22179 - 24245 (-)
Type: TC
Location: 22179 - 24245 (-)
Gene ID: Rep_15_c_48_22
Type: CAZyme
Location: 24414 - 26012 (-)
Type: CAZyme
Location: 24414 - 26012 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp017935745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.