dbCAN Logo

Cluster: Rep_15_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_15_c_47 Rep_15_c_47_114 117876 119066 + 3.A.1.11.8
TC Rep_15_c_47 Rep_15_c_47_115 119063 120079 + 3.A.1.11.1
TC Rep_15_c_47 Rep_15_c_47_116 120076 120948 + 3.A.1.11.2
STP Rep_15_c_47 Rep_15_c_47_117 121056 122102 + SBP_bac_1
STP Rep_15_c_47 Rep_15_c_47_118 122215 123594 + EPSP_synthase
TC Rep_15_c_47 Rep_15_c_47_119 123778 125439 + 4.C.1.1.6
CAZyme Rep_15_c_47 Rep_15_c_47_120 125520 128885 + GH149
TC Rep_15_c_47 Rep_15_c_47_121 129132 130202 + 9.B.146.1.3
Gene ID: Rep_15_c_47_114
Type: TC
Location: 117876 - 119066 (+)
Gene ID: Rep_15_c_47_115
Type: TC
Location: 119063 - 120079 (+)
Gene ID: Rep_15_c_47_116
Type: TC
Location: 120076 - 120948 (+)
Gene ID: Rep_15_c_47_117
Type: STP
Location: 121056 - 122102 (+)
Gene ID: Rep_15_c_47_118
Type: STP
Location: 122215 - 123594 (+)
Gene ID: Rep_15_c_47_119
Type: TC
Location: 123778 - 125439 (+)
Gene ID: Rep_15_c_47_120
Type: CAZyme
Location: 125520 - 128885 (+)
Gene ID: Rep_15_c_47_121
Type: TC
Location: 129132 - 130202 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List