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Cluster: Rep_15_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_15_c_32 Rep_15_c_32_24 26457 29264 - GH2
NULL(UNKNOWN) Rep_15_c_32 Rep_15_c_32_25 29372 29587 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_15_c_32 Rep_15_c_32_26 29717 31015 + 3.A.1.1.4
TC Rep_15_c_32 Rep_15_c_32_27 31137 32015 + 3.A.1.1.4
TC Rep_15_c_32 Rep_15_c_32_28 32015 32830 + 3.A.1.1.4
TF Rep_15_c_32 Rep_15_c_32_29 32915 33595 - GerE
STP Rep_15_c_32 Rep_15_c_32_30 33598 34938 - HATPase_c
TC Rep_15_c_32 Rep_15_c_32_31 35289 36641 + 2.A.66.1.32
Gene ID: Rep_15_c_32_24
Type: CAZyme
Location: 26457 - 29264 (-)
Gene ID: Rep_15_c_32_25
Type:
Location: 29372 - 29587 (-)
Gene ID: Rep_15_c_32_26
Type: TC
Location: 29717 - 31015 (+)
Gene ID: Rep_15_c_32_27
Type: TC
Location: 31137 - 32015 (+)
Gene ID: Rep_15_c_32_28
Type: TC
Location: 32015 - 32830 (+)
Gene ID: Rep_15_c_32_29
Type: TF
Location: 32915 - 33595 (-)
Gene ID: Rep_15_c_32_30
Type: STP
Location: 33598 - 34938 (-)
Gene ID: Rep_15_c_32_31
Type: TC
Location: 35289 - 36641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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