dbCAN Logo

Cluster: Rep_15_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_15_c_30 Rep_15_c_30_5 2823 5987 - 2.A.6.3.11
TC Rep_15_c_30 Rep_15_c_30_6 5984 6943 - 2.A.6.3.11
pfam Rep_15_c_30 Rep_15_c_30_7 6999 8405 - OEP | OEP
STP Rep_15_c_30 Rep_15_c_30_8 8594 10657 + MCPsignal
TC Rep_15_c_30 Rep_15_c_30_9 10718 11494 + 2.A.5.5.2
pfam Rep_15_c_30 Rep_15_c_30_10 11531 13894 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region
CAZyme Rep_15_c_30 Rep_15_c_30_11 14201 16447 - GH36
Gene ID: Rep_15_c_30_5
Type: TC
Location: 2823 - 5987 (-)
Gene ID: Rep_15_c_30_6
Type: TC
Location: 5984 - 6943 (-)
Gene ID: Rep_15_c_30_7
Type: pfam
Location: 6999 - 8405 (-)
Gene ID: Rep_15_c_30_8
Type: STP
Location: 8594 - 10657 (+)
Gene ID: Rep_15_c_30_9
Type: TC
Location: 10718 - 11494 (+)
Gene ID: Rep_15_c_30_10
Type: pfam
Location: 11531 - 13894 (-)
Gene ID: Rep_15_c_30_11
Type: CAZyme
Location: 14201 - 16447 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List