Cluster: Rep_1595_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_1595
- CGC Family ID: CGCFAM_00007
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_1 | 1 | 681 | + | GH25 |
| pfam | Rep_1595_c_52 | Rep_1595_c_52_2 | 746 | 2038 | + | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | Rep_1595_c_52 | Rep_1595_c_52_3 | 2307 | 3284 | + | TOD1_MUCI70 |
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_4 | 3299 | 5176 | + | GT2 |
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_5 | 5196 | 7313 | + | GT2 |
| TC | Rep_1595_c_52 | Rep_1595_c_52_6 | 7327 | 8067 | + | 3.A.1.103.4 |
| TC | Rep_1595_c_52 | Rep_1595_c_52_7 | 8077 | 8838 | + | 3.A.1.103.4 |
| pfam | Rep_1595_c_52 | Rep_1595_c_52_8 | 8840 | 10156 | + | DUF6056 |
| NULL(UNKNOWN) | Rep_1595_c_52 | Rep_1595_c_52_9 | 10178 | 12214 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_10 | 12286 | 13224 | + | GT2 |
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_11 | 13229 | 14176 | + | GT2 |
| NULL(UNKNOWN) | Rep_1595_c_52 | Rep_1595_c_52_12 | 14393 | 15910 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1595_c_52 | Rep_1595_c_52_13 | 15907 | 16878 | + | GT2 |
Gene ID: Rep_1595_c_52_1
Type: CAZyme
Location: 1 - 681 (+)
Type: CAZyme
Location: 1 - 681 (+)
Gene ID: Rep_1595_c_52_2
Type: pfam
Location: 746 - 2038 (+)
Type: pfam
Location: 746 - 2038 (+)
Gene ID: Rep_1595_c_52_3
Type: pfam
Location: 2307 - 3284 (+)
Type: pfam
Location: 2307 - 3284 (+)
Gene ID: Rep_1595_c_52_4
Type: CAZyme
Location: 3299 - 5176 (+)
Type: CAZyme
Location: 3299 - 5176 (+)
Gene ID: Rep_1595_c_52_5
Type: CAZyme
Location: 5196 - 7313 (+)
Type: CAZyme
Location: 5196 - 7313 (+)
Gene ID: Rep_1595_c_52_6
Type: TC
Location: 7327 - 8067 (+)
Type: TC
Location: 7327 - 8067 (+)
Gene ID: Rep_1595_c_52_7
Type: TC
Location: 8077 - 8838 (+)
Type: TC
Location: 8077 - 8838 (+)
Gene ID: Rep_1595_c_52_8
Type: pfam
Location: 8840 - 10156 (+)
Type: pfam
Location: 8840 - 10156 (+)
Gene ID: Rep_1595_c_52_9
Type:
Location: 10178 - 12214 (+)
Type:
Location: 10178 - 12214 (+)
Gene ID: Rep_1595_c_52_10
Type: CAZyme
Location: 12286 - 13224 (+)
Type: CAZyme
Location: 12286 - 13224 (+)
Gene ID: Rep_1595_c_52_11
Type: CAZyme
Location: 13229 - 14176 (+)
Type: CAZyme
Location: 13229 - 14176 (+)
Gene ID: Rep_1595_c_52_12
Type:
Location: 14393 - 15910 (+)
Type:
Location: 14393 - 15910 (+)
Gene ID: Rep_1595_c_52_13
Type: CAZyme
Location: 15907 - 16878 (+)
Type: CAZyme
Location: 15907 - 16878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Onthousia
Species
Onthousia sp958428295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.