Cluster: Rep_1589_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_1589
- CGC Family ID: CGCFAM_03042
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1589_c_49 | Rep_1589_c_49_28 | 26801 | 28204 | - | 2.A.50.2.1 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_29 | 28206 | 28925 | - | GT26 |
| pfam | Rep_1589_c_49 | Rep_1589_c_49_30 | 28938 | 29981 | - | Acyl_transf_3 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_31 | 30007 | 30849 | - | CE4 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_32 | 30860 | 33436 | - | GT4 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_33 | 33445 | 34524 | - | GT4 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_34 | 34528 | 35385 | - | GT2 |
| CAZyme | Rep_1589_c_49 | Rep_1589_c_49_35 | 35390 | 36382 | - | GT2 |
Gene ID: Rep_1589_c_49_28
Type: TC
Location: 26801 - 28204 (-)
Type: TC
Location: 26801 - 28204 (-)
Gene ID: Rep_1589_c_49_29
Type: CAZyme
Location: 28206 - 28925 (-)
Type: CAZyme
Location: 28206 - 28925 (-)
Gene ID: Rep_1589_c_49_30
Type: pfam
Location: 28938 - 29981 (-)
Type: pfam
Location: 28938 - 29981 (-)
Gene ID: Rep_1589_c_49_31
Type: CAZyme
Location: 30007 - 30849 (-)
Type: CAZyme
Location: 30007 - 30849 (-)
Gene ID: Rep_1589_c_49_32
Type: CAZyme
Location: 30860 - 33436 (-)
Type: CAZyme
Location: 30860 - 33436 (-)
Gene ID: Rep_1589_c_49_33
Type: CAZyme
Location: 33445 - 34524 (-)
Type: CAZyme
Location: 33445 - 34524 (-)
Gene ID: Rep_1589_c_49_34
Type: CAZyme
Location: 34528 - 35385 (-)
Type: CAZyme
Location: 34528 - 35385 (-)
Gene ID: Rep_1589_c_49_35
Type: CAZyme
Location: 35390 - 36382 (-)
Type: CAZyme
Location: 35390 - 36382 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
SIG204
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.