Cluster: Rep_1579_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1579
- CGC Family ID: CGCFAM_00195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1579_c_0 | Rep_1579_c_0_764 | 699953 | 700624 | + | 8.A.3.2.1 |
| TC | Rep_1579_c_0 | Rep_1579_c_0_765 | 700629 | 701351 | + | 8.A.3.2.1 |
| pfam | Rep_1579_c_0 | Rep_1579_c_0_766 | 701351 | 702079 | + | CpsB_CapC |
| TC | Rep_1579_c_0 | Rep_1579_c_0_767 | 702101 | 702766 | + | 9.B.18.1.2 |
| CAZyme | Rep_1579_c_0 | Rep_1579_c_0_768 | 702853 | 703965 | + | GT4 |
| CAZyme | Rep_1579_c_0 | Rep_1579_c_0_769 | 703985 | 705655 | + | GT4 |
Gene ID: Rep_1579_c_0_764
Type: TC
Location: 699953 - 700624 (+)
Type: TC
Location: 699953 - 700624 (+)
Gene ID: Rep_1579_c_0_765
Type: TC
Location: 700629 - 701351 (+)
Type: TC
Location: 700629 - 701351 (+)
Gene ID: Rep_1579_c_0_766
Type: pfam
Location: 701351 - 702079 (+)
Type: pfam
Location: 701351 - 702079 (+)
Gene ID: Rep_1579_c_0_767
Type: TC
Location: 702101 - 702766 (+)
Type: TC
Location: 702101 - 702766 (+)
Gene ID: Rep_1579_c_0_768
Type: CAZyme
Location: 702853 - 703965 (+)
Type: CAZyme
Location: 702853 - 703965 (+)
Gene ID: Rep_1579_c_0_769
Type: CAZyme
Location: 703985 - 705655 (+)
Type: CAZyme
Location: 703985 - 705655 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-417
Species
CAG-417 sp000432835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1579_c_0_766 | omnivore > vegetarian | 23.14282 | 0.03894 |