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Cluster: Rep_1576_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1576_c_0 Rep_1576_c_0_893 910168 912552 - 2.A.118.1.1
pfam Rep_1576_c_0 Rep_1576_c_0_894 912552 913574 - OTCace | OTCace_N
pfam Rep_1576_c_0 Rep_1576_c_0_895 913538 914782 - ADI
TC Rep_1576_c_0 Rep_1576_c_0_896 914864 915580 - 3.A.1.3.15
TC Rep_1576_c_0 Rep_1576_c_0_897 915567 916268 - 3.A.1.3.15
TC Rep_1576_c_0 Rep_1576_c_0_898 916284 917015 - 3.A.1.3.2
TC Rep_1576_c_0 Rep_1576_c_0_899 917307 918059 + 3.A.1.16.2
TC Rep_1576_c_0 Rep_1576_c_0_900 918043 918840 + 3.A.1.17.13
CAZyme Rep_1576_c_0 Rep_1576_c_0_901 918956 922024 - GH10
Gene ID: Rep_1576_c_0_893
Type: TC
Location: 910168 - 912552 (-)
Gene ID: Rep_1576_c_0_894
Type: pfam
Location: 912552 - 913574 (-)
Gene ID: Rep_1576_c_0_895
Type: pfam
Location: 913538 - 914782 (-)
Gene ID: Rep_1576_c_0_896
Type: TC
Location: 914864 - 915580 (-)
Gene ID: Rep_1576_c_0_897
Type: TC
Location: 915567 - 916268 (-)
Gene ID: Rep_1576_c_0_898
Type: TC
Location: 916284 - 917015 (-)
Gene ID: Rep_1576_c_0_899
Type: TC
Location: 917307 - 918059 (+)
Gene ID: Rep_1576_c_0_900
Type: TC
Location: 918043 - 918840 (+)
Gene ID: Rep_1576_c_0_901
Type: CAZyme
Location: 918956 - 922024 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-877
→
Species
CAG-877 sp900753325

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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