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Cluster: Rep_1576_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1576_c_0 Rep_1576_c_0_807 812474 813412 - 3.A.1.105.7
STP Rep_1576_c_0 Rep_1576_c_0_808 813431 814042 - TetR_N
pfam Rep_1576_c_0 Rep_1576_c_0_809 814180 814908 + Acyltransferase
CAZyme Rep_1576_c_0 Rep_1576_c_0_810 814909 816015 + GT28
pfam Rep_1576_c_0 Rep_1576_c_0_811 816102 819251 - FtsX | FtsX
TC Rep_1576_c_0 Rep_1576_c_0_812 819245 819553 - 3.A.1.122.14
TC Rep_1576_c_0 Rep_1576_c_0_813 819578 819946 - 3.A.1.122.14
pfam Rep_1576_c_0 Rep_1576_c_0_814 820079 821617 - Gram_pos_anchor | SpaA
TC Rep_1576_c_0 Rep_1576_c_0_815 821780 823468 - 3.A.1.106.15
Gene ID: Rep_1576_c_0_807
Type: TC
Location: 812474 - 813412 (-)
Gene ID: Rep_1576_c_0_808
Type: STP
Location: 813431 - 814042 (-)
Gene ID: Rep_1576_c_0_809
Type: pfam
Location: 814180 - 814908 (+)
Gene ID: Rep_1576_c_0_810
Type: CAZyme
Location: 814909 - 816015 (+)
Gene ID: Rep_1576_c_0_811
Type: pfam
Location: 816102 - 819251 (-)
Gene ID: Rep_1576_c_0_812
Type: TC
Location: 819245 - 819553 (-)
Gene ID: Rep_1576_c_0_813
Type: TC
Location: 819578 - 819946 (-)
Gene ID: Rep_1576_c_0_814
Type: pfam
Location: 820079 - 821617 (-)
Gene ID: Rep_1576_c_0_815
Type: TC
Location: 821780 - 823468 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
CAG-877
→
Species
CAG-877 sp900753325

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_1576_c_0_812 vegan > omnivore 2.53453 0.04890

🧭 Explore Read Mapping of CGC

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