Cluster: Rep_1576_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1576
- CGC Family ID: CGCFAM_00386
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1576_c_0 | Rep_1576_c_0_302 | 302680 | 303369 | + | GT51 |
| TF | Rep_1576_c_0 | Rep_1576_c_0_303 | 303461 | 304123 | + | Trans_reg_C |
| STP | Rep_1576_c_0 | Rep_1576_c_0_304 | 304120 | 305136 | + | HATPase_c |
| TC | Rep_1576_c_0 | Rep_1576_c_0_305 | 305255 | 305761 | + | 3.A.1.134.3 |
| TC | Rep_1576_c_0 | Rep_1576_c_0_306 | 305775 | 306020 | + | 3.A.1.134.12 |
| TC | Rep_1576_c_0 | Rep_1576_c_0_307 | 306010 | 308055 | + | 3.A.1.134.7 |
Gene ID: Rep_1576_c_0_302
Type: CAZyme
Location: 302680 - 303369 (+)
Type: CAZyme
Location: 302680 - 303369 (+)
Gene ID: Rep_1576_c_0_303
Type: TF
Location: 303461 - 304123 (+)
Type: TF
Location: 303461 - 304123 (+)
Gene ID: Rep_1576_c_0_304
Type: STP
Location: 304120 - 305136 (+)
Type: STP
Location: 304120 - 305136 (+)
Gene ID: Rep_1576_c_0_305
Type: TC
Location: 305255 - 305761 (+)
Type: TC
Location: 305255 - 305761 (+)
Gene ID: Rep_1576_c_0_306
Type: TC
Location: 305775 - 306020 (+)
Type: TC
Location: 305775 - 306020 (+)
Gene ID: Rep_1576_c_0_307
Type: TC
Location: 306010 - 308055 (+)
Type: TC
Location: 306010 - 308055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-877
Species
CAG-877 sp900753325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1576_c_0_302 | vegan > omnivore | 1.27636 | 0.04890 |