Cluster: Rep_1570_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1570
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1570_c_18 | Rep_1570_c_18_9 | 4525 | 5922 | - | 9.A.11.1.2 |
| pfam | Rep_1570_c_18 | Rep_1570_c_18_10 | 6001 | 7113 | + | TRAM | Cons_hypoth95 | MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31 |
| CAZyme | Rep_1570_c_18 | Rep_1570_c_18_11 | 7182 | 9029 | + | GH13_39 |
| TC | Rep_1570_c_18 | Rep_1570_c_18_12 | 9291 | 9626 | + | 3.A.1.135.5 |
| pfam | Rep_1570_c_18 | Rep_1570_c_18_13 | 9686 | 10048 | + | DUF4234 |
| pfam | Rep_1570_c_18 | Rep_1570_c_18_14 | 10032 | 10448 | + | DUF2752 |
| TC | Rep_1570_c_18 | Rep_1570_c_18_15 | 10440 | 11189 | - | 2.A.5.5.1 |
Gene ID: Rep_1570_c_18_9
Type: TC
Location: 4525 - 5922 (-)
Type: TC
Location: 4525 - 5922 (-)
Gene ID: Rep_1570_c_18_10
Type: pfam
Location: 6001 - 7113 (+)
Type: pfam
Location: 6001 - 7113 (+)
Gene ID: Rep_1570_c_18_11
Type: CAZyme
Location: 7182 - 9029 (+)
Type: CAZyme
Location: 7182 - 9029 (+)
Gene ID: Rep_1570_c_18_12
Type: TC
Location: 9291 - 9626 (+)
Type: TC
Location: 9291 - 9626 (+)
Gene ID: Rep_1570_c_18_13
Type: pfam
Location: 9686 - 10048 (+)
Type: pfam
Location: 9686 - 10048 (+)
Gene ID: Rep_1570_c_18_14
Type: pfam
Location: 10032 - 10448 (+)
Type: pfam
Location: 10032 - 10448 (+)
Gene ID: Rep_1570_c_18_15
Type: TC
Location: 10440 - 11189 (-)
Type: TC
Location: 10440 - 11189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Faecimonas
Species
Faecimonas sp900554315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.