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Cluster: Rep_1570_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1570_c_11 Rep_1570_c_11_41 37148 37813 + 8.A.3.2.1
TC Rep_1570_c_11 Rep_1570_c_11_42 37818 38543 + 8.A.3.2.1
pfam Rep_1570_c_11 Rep_1570_c_11_43 38543 39271 + CpsB_CapC
TC Rep_1570_c_11 Rep_1570_c_11_44 39324 39995 + 9.B.18.1.3
pfam Rep_1570_c_11 Rep_1570_c_11_45 39988 40449 + Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4
CAZyme Rep_1570_c_11 Rep_1570_c_11_46 40535 41167 + GT4
pfam Rep_1570_c_11 Rep_1570_c_11_47 41168 42250 + EpsG
CAZyme Rep_1570_c_11 Rep_1570_c_11_48 42269 43063 + GT2
CAZyme Rep_1570_c_11 Rep_1570_c_11_49 43074 44168 + GT4
CAZyme Rep_1570_c_11 Rep_1570_c_11_50 44243 46297 + GT2
Gene ID: Rep_1570_c_11_41
Type: TC
Location: 37148 - 37813 (+)
Gene ID: Rep_1570_c_11_42
Type: TC
Location: 37818 - 38543 (+)
Gene ID: Rep_1570_c_11_43
Type: pfam
Location: 38543 - 39271 (+)
Gene ID: Rep_1570_c_11_44
Type: TC
Location: 39324 - 39995 (+)
Gene ID: Rep_1570_c_11_45
Type: pfam
Location: 39988 - 40449 (+)
Gene ID: Rep_1570_c_11_46
Type: CAZyme
Location: 40535 - 41167 (+)
Gene ID: Rep_1570_c_11_47
Type: pfam
Location: 41168 - 42250 (+)
Gene ID: Rep_1570_c_11_48
Type: CAZyme
Location: 42269 - 43063 (+)
Gene ID: Rep_1570_c_11_49
Type: CAZyme
Location: 43074 - 44168 (+)
Gene ID: Rep_1570_c_11_50
Type: CAZyme
Location: 44243 - 46297 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Faecimonas
→
Species
Faecimonas sp900554315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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