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Cluster: Rep_1570_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1570_c_4 Rep_1570_c_4_76 78409 79389 + 9.B.146.1.6
pfam Rep_1570_c_4 Rep_1570_c_4_77 79479 80360 + Tim44
pfam Rep_1570_c_4 Rep_1570_c_4_78 80377 80922 + Tim44
TC Rep_1570_c_4 Rep_1570_c_4_79 80980 82068 + 2.A.103.1.3
CAZyme Rep_1570_c_4 Rep_1570_c_4_80 82135 82500 + GT2
NULL(UNKNOWN) Rep_1570_c_4 Rep_1570_c_4_81 82617 83132 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1570_c_4 Rep_1570_c_4_82 83252 84043 + 2.A.5.5.2
TC Rep_1570_c_4 Rep_1570_c_4_83 84055 84771 + 3.A.1.6.3
Gene ID: Rep_1570_c_4_76
Type: TC
Location: 78409 - 79389 (+)
Gene ID: Rep_1570_c_4_77
Type: pfam
Location: 79479 - 80360 (+)
Gene ID: Rep_1570_c_4_78
Type: pfam
Location: 80377 - 80922 (+)
Gene ID: Rep_1570_c_4_79
Type: TC
Location: 80980 - 82068 (+)
Gene ID: Rep_1570_c_4_80
Type: CAZyme
Location: 82135 - 82500 (+)
Gene ID: Rep_1570_c_4_81
Type:
Location: 82617 - 83132 (+)
Gene ID: Rep_1570_c_4_82
Type: TC
Location: 83252 - 84043 (+)
Gene ID: Rep_1570_c_4_83
Type: TC
Location: 84055 - 84771 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
Faecimonas
→
Species
Faecimonas sp900554315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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