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Cluster: Rep_1569_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1569_c_80 Rep_1569_c_80_1 3 902 + 2.A.103.1.3
pfam Rep_1569_c_80 Rep_1569_c_80_2 904 1455 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7
CAZyme Rep_1569_c_80 Rep_1569_c_80_3 1510 2511 + GT2
TC Rep_1569_c_80 Rep_1569_c_80_4 2631 3413 + 2.A.5.5.2
TC Rep_1569_c_80 Rep_1569_c_80_5 3426 4148 + 3.A.1.6.3
Gene ID: Rep_1569_c_80_1
Type: TC
Location: 3 - 902 (+)
Gene ID: Rep_1569_c_80_2
Type: pfam
Location: 904 - 1455 (+)
Gene ID: Rep_1569_c_80_3
Type: CAZyme
Location: 1510 - 2511 (+)
Gene ID: Rep_1569_c_80_4
Type: TC
Location: 2631 - 3413 (+)
Gene ID: Rep_1569_c_80_5
Type: TC
Location: 3426 - 4148 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RF39
Family
UBA660

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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