Cluster: Rep_1566_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1566
- CGC Family ID: CGCFAM_06373
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1566_c_28 | Rep_1566_c_28_17 | 15890 | 17107 | - | GH25 |
| TC | Rep_1566_c_28 | Rep_1566_c_28_18 | 17387 | 18607 | - | 5.A.1.2.1 |
| NULL(UNKNOWN) | Rep_1566_c_28 | Rep_1566_c_28_19 | 18703 | 20382 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1566_c_28 | Rep_1566_c_28_20 | 20369 | 21097 | - | 3.A.1.147.8 |
| pfam | Rep_1566_c_28 | Rep_1566_c_28_21 | 21209 | 22150 | - | CorA |
| TC | Rep_1566_c_28 | Rep_1566_c_28_22 | 22246 | 23361 | - | 9.B.160.1.10 |
Gene ID: Rep_1566_c_28_17
Type: CAZyme
Location: 15890 - 17107 (-)
Type: CAZyme
Location: 15890 - 17107 (-)
Gene ID: Rep_1566_c_28_18
Type: TC
Location: 17387 - 18607 (-)
Type: TC
Location: 17387 - 18607 (-)
Gene ID: Rep_1566_c_28_19
Type:
Location: 18703 - 20382 (-)
Type:
Location: 18703 - 20382 (-)
Gene ID: Rep_1566_c_28_20
Type: TC
Location: 20369 - 21097 (-)
Type: TC
Location: 20369 - 21097 (-)
Gene ID: Rep_1566_c_28_21
Type: pfam
Location: 21209 - 22150 (-)
Type: pfam
Location: 21209 - 22150 (-)
Gene ID: Rep_1566_c_28_22
Type: TC
Location: 22246 - 23361 (-)
Type: TC
Location: 22246 - 23361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Faecimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.