Cluster: Rep_1562_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1562
- CGC Family ID: CGCFAM_02904
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1562_c_38 | Rep_1562_c_38_4 | 2021 | 3145 | + | CBM50 | CBM50 |
| TC | Rep_1562_c_38 | Rep_1562_c_38_5 | 3395 | 4477 | + | 3.A.1.11.1 |
| TC | Rep_1562_c_38 | Rep_1562_c_38_6 | 4464 | 5321 | + | 3.A.1.11.1 |
| TC | Rep_1562_c_38 | Rep_1562_c_38_7 | 5321 | 6115 | + | 3.A.1.11.1 |
| TC | Rep_1562_c_38 | Rep_1562_c_38_8 | 6108 | 7139 | + | 3.A.1.11.8 |
| pfam | Rep_1562_c_38 | Rep_1562_c_38_9 | 7172 | 8152 | + | OTCace | OTCace_N |
| TC | Rep_1562_c_38 | Rep_1562_c_38_10 | 8156 | 9571 | + | 2.A.3.7.7 |
Gene ID: Rep_1562_c_38_4
Type: CAZyme
Location: 2021 - 3145 (+)
Type: CAZyme
Location: 2021 - 3145 (+)
Gene ID: Rep_1562_c_38_5
Type: TC
Location: 3395 - 4477 (+)
Type: TC
Location: 3395 - 4477 (+)
Gene ID: Rep_1562_c_38_6
Type: TC
Location: 4464 - 5321 (+)
Type: TC
Location: 4464 - 5321 (+)
Gene ID: Rep_1562_c_38_7
Type: TC
Location: 5321 - 6115 (+)
Type: TC
Location: 5321 - 6115 (+)
Gene ID: Rep_1562_c_38_8
Type: TC
Location: 6108 - 7139 (+)
Type: TC
Location: 6108 - 7139 (+)
Gene ID: Rep_1562_c_38_9
Type: pfam
Location: 7172 - 8152 (+)
Type: pfam
Location: 7172 - 8152 (+)
Gene ID: Rep_1562_c_38_10
Type: TC
Location: 8156 - 9571 (+)
Type: TC
Location: 8156 - 9571 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Scybalousia
Species
Scybalousia sp900543675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.